=========================================================================== Contents of the test set =========================================================================== (Edwards, Stoll, Optimal Tikhonov Regularization for DEER Spectroscopy) The test set is contained in three files: - distributions_2LZM: model distributions - timetraces_2LZM: noise-free time-domain traces - Sdata_2LMZ: noisy time-domain traces distributons_2LZM.mat --------------------------------------------------------------------------- This file contains the model distributions obtained from the 2LZM PBD crystal structure of T4 lysozyme, and associated statistics. sitePair array of residue indices for all double labeled mutants P0 array of all 5622 model distributions, 1341 points each r0 associated high-resolution distance vector r_xy xy-th percentile distance for each model distribution r_iqr inter-quartile range for each distribution r_mean mean distance for each distribution r_median median distance for each distribution r_mode modal distance for each distribution r_std standard deviation for each distribution npeaks number of significant local maxima for each distribution skew skewness for each distribution timetraces_2LZM.mat --------------------------------------------------------------------------- This file contains all unique noise-free time-domain DEER traces generated from the model distributions. data.S0 noise-free time trace data.Pidx index of model distribution (P0 in distributions_2LZM.mat) data.tmin minimum t (microseconds) data.tmax maximum t (microseconds) data.dt time increment (microseconds) data.nt number of points data.sigma noise standard deviation data.seeds seeds for random-number generator to generate noise (one seed for each of 10 noise realizations) Sdata_2LZM.mat --------------------------------------------------------------------------- This file contains all noisy time-traces generated from the noise-free traces. Sdata.S all noisy time traces Sdata.tmin minimum t (microseconds) Sdata.tmax maximum t (microseconds) Sdata.dt time increment (microseconds) Sdata.nt number of points Sdata.sigma noise standard deviation Sdata.seed seed for random-number generator Sdata.sites residue numbers of associated doubly-labeled mutant Sdata.idxP index of associated model distribution (for distributions_2LZM.mat) Sdata.idxS0 index of associated noise-free trace (for timetraces_2LZM.mat) sdata.idxseed index into the seed vector (in timetraces_2LZM.mat)