Optogenetic Methods for Spatiotemporally Resolved Observation of H2O2 in Biological Systems

dc.contributor.advisorBerndt, Andre
dc.contributor.authorLee, Justin
dc.date.accessioned2025-01-23T20:03:44Z
dc.date.issued2025-01-23
dc.date.submitted2024
dc.descriptionThesis (Ph.D.)--University of Washington, 2024
dc.description.abstractWhile hydrogen peroxide (H2O2) is widely recognized as a key redox signaling molecule essential for normal cellular functions, its supraphysiological accumulation is associated with the pathogenesis and progression of various diseases—including atherosclerosis, Duchenne muscular dystrophy (DMD), Alzheimer’s disease, and cancer—making it a primary target of antioxidative therapeutics. Due to its significant physiological role, precise understanding of peroxide dynamics at both intracellular and intercellular levels is crucial for effective and safe therapeutic discovery. Developing tools that enable site-specific and real-time detection of H2O2 in cells and model organisms is therefore essential.Guided by experimental and computational structural analyses, we engineered oROS, a multicolor fluorescence sensor suite for highly sensitive, real-time, in situ detection of H2O2. From human stem cell-derived models to animal models, oROS sensors demonstrate robust functionality in clinically relevant systems for studying peroxide biology. For instance, oROS elucidated the therapeutic efficacy of a putative antioxidative agent for Alzheimer’s disease and detected H2O2 signals in vivo to validate the NADPH oxidase-dependent opioid receptor inactivation mechanism in a systemic context. Furthermore, its multiplexed use with calcium and redox potential indicators enabled time-locked monitoring of H2O2 in relation to its key interactants. Lastly, oROS sensors were targeted to various subcellular compartments, including microdomains near the inner and outer plasma membranes, providing unprecedented precision in monitoring membrane H2O2 topology. We envision that oROS and its applications will stimulate new questions and discoveries in redox biology and medicine.
dc.embargo.lift2026-01-23T20:03:44Z
dc.embargo.termsDelay release for 1 year -- then make Open Access
dc.format.mimetypeapplication/pdf
dc.identifier.otherLee_washington_0250E_27689.pdf
dc.identifier.urihttps://hdl.handle.net/1773/52696
dc.language.isoen_US
dc.rightsCC BY
dc.subjectFluorescent Protein
dc.subjectH2O2
dc.subjectImaging
dc.subjectOptogenetics
dc.subjectProtein Design/Engineering
dc.subjectSensor
dc.subjectBioengineering
dc.subjectBiochemistry
dc.subjectMolecular biology
dc.subject.otherMolecular engineering
dc.titleOptogenetic Methods for Spatiotemporally Resolved Observation of H2O2 in Biological Systems
dc.typeThesis

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